Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 MST1L-201ENST00000442552 2185 ntBASIC15.79■□□□□ 0.12
SIPA1Q96FS4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AC000095.1-201ENST00000603208 874 ntBASIC15.79■□□□□ 0.12
SIPA1Q96FS4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AC018892.3-201ENST00000623986 2499 ntBASIC15.79■□□□□ 0.12
SIPA1Q96FS4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 AC022494.1-201ENST00000466044 728 ntBASIC15.78■□□□□ 0.12
SIPA1Q96FS4 AP001889.1-201ENST00000525414 633 ntBASIC15.78■□□□□ 0.12
SIPA1Q96FS4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 REXO1L6P-201ENST00000603433 1515 ntBASIC15.78■□□□□ 0.12
SIPA1Q96FS4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.78■□□□□ 0.12
SIPA1Q96FS4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.78■□□□□ 0.12
SIPA1Q96FS4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SIPA1Q96FS4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms