Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SLED1-202ENST00000512051 380 ntBASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 AC074338.1-201ENST00000416825 156 ntBASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 AC114501.2-201ENST00000439631 535 ntBASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 INGX-202ENST00000489074 768 ntBASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 AC009407.1-201ENST00000568958 598 ntBASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC148Q8NFR7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 AL355385.1-201ENST00000606123 409 ntBASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC148Q8NFR7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms