Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 DBET-201ENST00000630918 3363 ntBASIC14.77□□□□□ -0.04
NUP43Q8NFH3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUP43Q8NFH3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.77□□□□□ -0.05
NUP43Q8NFH3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NUP43Q8NFH3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 AL645939.2-201ENST00000427340 991 ntBASIC14.76□□□□□ -0.05
NUP43Q8NFH3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 MIR6069-201ENST00000620069 79 ntBASIC14.76□□□□□ -0.05
NUP43Q8NFH3 Z92544.3-201ENST00000624747 417 ntBASIC14.76□□□□□ -0.05
NUP43Q8NFH3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms