Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 TREML5P-201ENST00000421694 576 ntBASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC097493.3-201ENST00000509725 367 ntBASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AL512361.1-201ENST00000554200 418 ntBASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC087499.5-201ENST00000452760 1342 ntBASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC013268.4-201ENST00000637413 2228 ntBASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 MIR943-201ENST00000401286 94 ntBASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC092580.3-201ENST00000430932 139 ntBASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC010336.2-201ENST00000564226 506 ntBASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35BQ8NCS4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TMEM35BQ8NCS4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms