Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 MST1P2-201ENST00000457982 2291 ntBASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 AC105206.1-202ENST00000314927 2368 ntBASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 BX664615.1-201ENST00000443558 458 ntBASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CROCCP3Q8IVE0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TSPY22P-201ENST00000427496 604 ntBASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 AC112907.2-201ENST00000448639 330 ntBASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 YBX1P2-201ENST00000489612 999 ntBASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 LINC01238-205ENST00000567549 1107 ntBASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms