Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC002472.2-201ENST00000442739 958 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 ALG1L8P-201ENST00000533887 760 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 RN7SL204P-201ENST00000582831 262 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC008267.7-201ENST00000624570 1194 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC105250.1-201ENST00000509378 2057 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC71Q8IV32 AC112693.3-201ENST00000624819 1983 ntBASIC14.84□□□□□ -0.03
CCDC71Q8IV32 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC71Q8IV32 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 MIR661-201ENST00000384842 89 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AC015922.1-201ENST00000421102 1152 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AL512638.1-201ENST00000457493 794 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TERF1P3-201ENST00000505638 1227 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AP000842.3-202ENST00000569238 1080 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AP001350.2-201ENST00000625104 1094 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AC084121.4-201ENST00000641598 221 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AF228730.8-201ENST00000642140 221 ntBASIC14.83□□□□□ -0.04
CCDC71Q8IV32 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms