Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC068587.3-201ENST00000526613 355 ntBASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 DOC2GP-204ENST00000639052 2548 ntBASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBE3BQ7Z3V4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 CICP13-201ENST00000422015 2789 ntBASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 MIR6752-201ENST00000618442 71 ntBASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 AC026691.1-201ENST00000602502 2017 ntBASIC19.52■□□□□ 0.72
UBE3BQ7Z3V4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBE3BQ7Z3V4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
UBE3BQ7Z3V4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.52■□□□□ 0.71
UBE3BQ7Z3V4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBE3BQ7Z3V4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 CROCCP1-201ENST00000426910 5675 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 BCRP2-202ENST00000447763 634 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AC093433.1-201ENST00000458048 571 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 GAPDHP40-201ENST00000505218 1006 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 BCRP6-201ENST00000510112 632 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 BCRP7-201ENST00000511549 544 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 PTP4A1P2-201ENST00000546033 454 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 MIR6775-201ENST00000617557 69 ntBASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms