Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 AC025279.2-201ENST00000569730 653 ntBASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 AC092978.1-202ENST00000637590 1327 ntBASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OTOP1Q7RTM1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 TOMM22P5-201ENST00000416399 439 ntBASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AC022137.2-201ENST00000503482 481 ntBASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
OTOP1Q7RTM1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC124067.4-201ENST00000519691 2379 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 MIR648-201ENST00000385046 94 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 TARDBPP1-201ENST00000442013 1203 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 RPSAP36-202ENST00000494591 1261 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC078819.1-201ENST00000547454 765 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC012085.1-201ENST00000548270 765 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC243562.2-201ENST00000561247 970 ntBASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OTOP1Q7RTM1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms