Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 AC093512.1-201ENST00000617969 520 ntBASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AP000344.2-201ENST00000512987 629 ntBASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AL353135.1-201ENST00000606729 504 ntBASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AC092919.2-201ENST00000623631 1645 ntBASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 AC087481.3-201ENST00000602886 1894 ntBASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXR1Q6PIV2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 OR7E47P-204ENST00000575924 449 ntBASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 AC004835.2-201ENST00000603762 682 ntBASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 AGAP7P-201ENST00000582299 2062 ntBASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 AGAP14-201ENST00000624701 2060 ntBASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 DGCR9-201ENST00000609630 2415 ntBASIC16.53■□□□□ 0.24
FOXR1Q6PIV2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms