Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AC004233.3-201ENST00000607794 1269 ntBASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AP003680.1-201ENST00000598970 3660 ntBASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 REXO1L1P-202ENST00000608646 1974 ntBASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 COX20P2-201ENST00000452636 358 ntBASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AL589987.1-201ENST00000453380 819 ntBASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFWD3Q6PCD5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RFWD3Q6PCD5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RFWD3Q6PCD5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RFWD3Q6PCD5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RFWD3Q6PCD5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFWD3Q6PCD5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms