Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 AC093726.1-201ENST00000608064 963 ntBASIC14.26□□□□□ -0.13
RTL6Q6ICC9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 AC005052.1-201ENST00000625181 2492 ntBASIC14.26□□□□□ -0.13
RTL6Q6ICC9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTL6Q6ICC9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AZGP1P1-201ENST00000411909 902 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AC245100.5-201ENST00000452108 331 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 RN7SL837P-201ENST00000463010 287 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 HILS1-202ENST00000545329 423 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 LINC01115-203ENST00000606068 577 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 MIR8072-201ENST00000614241 80 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 REXO1L8P-201ENST00000604378 1897 ntBASIC14.25□□□□□ -0.13
RTL6Q6ICC9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RTL6Q6ICC9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 GPR53P-205ENST00000457298 1084 ntBASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms