Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC098614.1-201ENST00000368528 745 ntBASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 NME2P1-201ENST00000426182 414 ntBASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AL442647.2-201ENST00000429864 857 ntBASIC13.78□□□□□ -0.2
FREM1Q5H8C1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
FREM1Q5H8C1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 AC007541.1-201ENST00000570282 1469 ntBASIC13.77□□□□□ -0.2
FREM1Q5H8C1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 OR6D1P-203ENST00000641209 4860 ntBASIC13.77□□□□□ -0.2
FREM1Q5H8C1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
FREM1Q5H8C1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 AL512384.1-201ENST00000406683 331 ntBASIC13.77□□□□□ -0.21
FREM1Q5H8C1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 RPL13AP25-201ENST00000484130 612 ntBASIC13.77□□□□□ -0.21
FREM1Q5H8C1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 AC000095.1-201ENST00000603208 874 ntBASIC13.77□□□□□ -0.21
FREM1Q5H8C1 AL033527.5-201ENST00000641382 801 ntBASIC13.77□□□□□ -0.21
FREM1Q5H8C1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.77□□□□□ -0.21
FREM1Q5H8C1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms