Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AL590627.1-203ENST00000421194 1026 ntBASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 KRT18P3-201ENST00000451602 1288 ntBASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AL139010.1-201ENST00000454878 894 ntBASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AC027601.4-201ENST00000611259 610 ntBASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6AP1LQ52LC2 AC091951.1-201ENST00000512854 2465 ntBASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 HLA-H-201ENST00000383620 1096 ntBASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 AL645939.2-201ENST00000427340 991 ntBASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 AC140113.2-201ENST00000604370 208 ntBASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms