Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 BAATP1-201ENST00000412284 1225 ntBASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 AC016694.1-201ENST00000434179 700 ntBASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 GGT4P-201ENST00000623672 1708 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AC134915.1-201ENST00000426461 574 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 EEF1DP4-201ENST00000446006 880 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 CLUHP6-201ENST00000580789 941 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AL365330.1-201ENST00000607459 531 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AC091271.1-201ENST00000611877 1162 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 AC008687.7-202ENST00000637404 953 ntBASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.8■□□□□ 0.28
CTC1Q2NKJ3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms