Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 LINC01115-203ENST00000606068 577 ntBASIC14.87□□□□□ -0.03
TNFRSF17Q02223 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC090616.6-203ENST00000579186 1945 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC022144.1-201ENST00000602255 1580 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AL512638.1-201ENST00000457493 794 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 NFIC-211ENST00000641145 8399 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC087481.3-201ENST00000602886 1894 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AC009090.5-201ENST00000624886 2285 ntBASIC14.86□□□□□ -0.03
TNFRSF17Q02223 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFRSF17Q02223 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 BTBD7P1-201ENST00000447253 1453 ntBASIC14.85□□□□□ -0.03
TNFRSF17Q02223 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AC015922.1-201ENST00000421102 1152 ntBASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms