Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
IRX3P78415 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 ACTBP11-201ENST00000436287 1126 ntBASIC18.38■□□□□ 0.53
IRX3P78415 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
IRX3P78415 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.38■□□□□ 0.53
IRX3P78415 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.38■□□□□ 0.53
IRX3P78415 ENPP7P5-201ENST00000541031 1031 ntBASIC18.38■□□□□ 0.53
IRX3P78415 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.38■□□□□ 0.53
IRX3P78415 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.38■□□□□ 0.53
IRX3P78415 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.38■□□□□ 0.53
IRX3P78415 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 AC093525.8-201ENST00000624099 1342 ntBASIC18.38■□□□□ 0.53
IRX3P78415 INTS4P2-202ENST00000614726 2019 ntBASIC18.38■□□□□ 0.53
IRX3P78415 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX3P78415 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.38■□□□□ 0.53
IRX3P78415 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
IRX3P78415 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX3P78415 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
IRX3P78415 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 AC068587.3-201ENST00000526613 355 ntBASIC18.37■□□□□ 0.53
IRX3P78415 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 LINC02199-201ENST00000506655 2702 ntBASIC18.37■□□□□ 0.53
IRX3P78415 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
IRX3P78415 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX3P78415 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX3P78415 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
IRX3P78415 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IRX3P78415 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IRX3P78415 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX3P78415 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.36■□□□□ 0.53
IRX3P78415 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX3P78415 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX3P78415 AL355864.2-201ENST00000447420 863 ntBASIC18.36■□□□□ 0.53
IRX3P78415 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX3P78415 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 SLED1-202ENST00000512051 380 ntBASIC18.36■□□□□ 0.53
IRX3P78415 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX3P78415 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX3P78415 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
IRX3P78415 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX3P78415 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX3P78415 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms