Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 AC006970.2-201ENST00000450065 779 ntBASIC12.35□□□□□ -0.43
RAB5BP61020 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 RPS2P4-201ENST00000476944 856 ntBASIC12.35□□□□□ -0.43
RAB5BP61020 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.35□□□□□ -0.43
RAB5BP61020 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.35□□□□□ -0.43
RAB5BP61020 AC006277.1-201ENST00000624348 1610 ntBASIC12.35□□□□□ -0.43
RAB5BP61020 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
RAB5BP61020 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.34□□□□□ -0.43
RAB5BP61020 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.34□□□□□ -0.43
RAB5BP61020 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB5BP61020 WWOX-216ENST00000569818 525 ntBASIC12.34□□□□□ -0.43
RAB5BP61020 IKBKGP1-201ENST00000612193 1073 ntBASIC12.34□□□□□ -0.43
RAB5BP61020 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.34□□□□□ -0.43
RAB5BP61020 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 MIR6786-201ENST00000616843 113 ntBASIC12.34□□□□□ -0.43
RAB5BP61020 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms