Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC015656.1-201ENST00000624209 3578 ntBASIC13.79□□□□□ -0.2
CLDN12P56749 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLDN12P56749 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 RNPS1P1-201ENST00000507437 918 ntBASIC13.78□□□□□ -0.2
CLDN12P56749 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 MIR4751-201ENST00000578027 74 ntBASIC13.78□□□□□ -0.2
CLDN12P56749 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CLDN12P56749 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN12P56749 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN12P56749 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 AJ011931.1-201ENST00000618749 2492 ntBASIC13.78□□□□□ -0.2
CLDN12P56749 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN12P56749 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.77□□□□□ -0.2
CLDN12P56749 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.77□□□□□ -0.2
CLDN12P56749 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN12P56749 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
CLDN12P56749 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN12P56749 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.77□□□□□ -0.2
CLDN12P56749 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN12P56749 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLDN12P56749 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 HCG4P8-203ENST00000443049 980 ntBASIC13.77□□□□□ -0.21
CLDN12P56749 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN12P56749 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.77□□□□□ -0.21
CLDN12P56749 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms