Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.52■□□□□ 0.56
CACNB3P54284 GOLGA2P4-201ENST00000441462 777 ntBASIC18.52■□□□□ 0.56
CACNB3P54284 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.52■□□□□ 0.56
CACNB3P54284 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.52■□□□□ 0.56
CACNB3P54284 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.52■□□□□ 0.56
CACNB3P54284 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.52■□□□□ 0.56
CACNB3P54284 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CACNB3P54284 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CACNB3P54284 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.52■□□□□ 0.55
CACNB3P54284 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CACNB3P54284 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CACNB3P54284 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CACNB3P54284 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CACNB3P54284 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CACNB3P54284 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CACNB3P54284 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CACNB3P54284 KRT8P35-201ENST00000483942 1338 ntBASIC18.51■□□□□ 0.55
CACNB3P54284 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CACNB3P54284 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNB3P54284 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 AC006001.1-201ENST00000325130 474 ntBASIC18.51■□□□□ 0.55
CACNB3P54284 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CACNB3P54284 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.51■□□□□ 0.55
CACNB3P54284 GPAA1P2-201ENST00000417923 928 ntBASIC18.51■□□□□ 0.55
CACNB3P54284 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CACNB3P54284 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.51■□□□□ 0.55
CACNB3P54284 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNB3P54284 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CACNB3P54284 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNB3P54284 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNB3P54284 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNB3P54284 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CACNB3P54284 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CACNB3P54284 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CACNB3P54284 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.5■□□□□ 0.55
CACNB3P54284 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 AC069224.1-201ENST00000566372 1715 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 RNU1-114P-201ENST00000365297 166 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.5■□□□□ 0.55
CACNB3P54284 MIR1202-201ENST00000408529 83 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 KRT18P25-201ENST00000508931 1278 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 AC023310.1-201ENST00000554836 735 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 AC103810.3-201ENST00000583567 96 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.5■□□□□ 0.55
CACNB3P54284 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.5■□□□□ 0.55
CACNB3P54284 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNB3P54284 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNB3P54284 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.5■□□□□ 0.55
CACNB3P54284 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CACNB3P54284 LTB4R2-202ENST00000528054 3092 ntBASIC18.49■□□□□ 0.55
CACNB3P54284 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CACNB3P54284 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNB3P54284 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms