Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.22□□□□□ -0.13
ATRXP46100 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 AC015910.1-201ENST00000579400 975 ntBASIC14.22□□□□□ -0.13
ATRXP46100 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
ATRXP46100 AC011247.3-201ENST00000603297 438 ntBASIC14.22□□□□□ -0.13
ATRXP46100 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.22□□□□□ -0.13
ATRXP46100 KRT8P35-201ENST00000483942 1338 ntBASIC14.22□□□□□ -0.13
ATRXP46100 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.21□□□□□ -0.13
ATRXP46100 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.21□□□□□ -0.13
ATRXP46100 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ATRXP46100 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ATRXP46100 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.21□□□□□ -0.13
ATRXP46100 AC010900.1-201ENST00000449849 1296 ntBASIC14.21□□□□□ -0.13
ATRXP46100 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.21□□□□□ -0.13
ATRXP46100 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.21□□□□□ -0.13
ATRXP46100 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 PCDHB18P-201ENST00000524813 2368 ntBASIC14.21□□□□□ -0.13
ATRXP46100 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 HLA-A-202ENST00000376806 1854 ntBASIC14.21□□□□□ -0.13
ATRXP46100 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ATRXP46100 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.21□□□□□ -0.13
ATRXP46100 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.21□□□□□ -0.13
ATRXP46100 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATRXP46100 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.21□□□□□ -0.13
ATRXP46100 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ATRXP46100 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ATRXP46100 AL132780.4-201ENST00000624870 1135 ntBASIC14.21□□□□□ -0.13
ATRXP46100 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.21□□□□□ -0.14
ATRXP46100 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
ATRXP46100 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
ATRXP46100 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ATRXP46100 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
ATRXP46100 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ATRXP46100 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ATRXP46100 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ATRXP46100 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 PDIA3P2-201ENST00000428073 158 ntBASIC14.2□□□□□ -0.14
ATRXP46100 AC011742.3-201ENST00000439053 820 ntBASIC14.2□□□□□ -0.14
ATRXP46100 AC024293.1-201ENST00000467930 498 ntBASIC14.2□□□□□ -0.14
ATRXP46100 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.2□□□□□ -0.14
ATRXP46100 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.2□□□□□ -0.14
ATRXP46100 AL161773.1-201ENST00000624845 863 ntBASIC14.2□□□□□ -0.14
ATRXP46100 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 AP003680.1-201ENST00000598970 3660 ntBASIC14.2□□□□□ -0.14
ATRXP46100 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATRXP46100 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.2□□□□□ -0.14
ATRXP46100 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms