Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA4P43681 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CHRNA4P43681 AC022532.1-201ENST00000624563 1728 ntBASIC15.91■□□□□ 0.14
CHRNA4P43681 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA4P43681 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CHRNA4P43681 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 TSSK5P-201ENST00000423978 907 ntBASIC15.9■□□□□ 0.14
CHRNA4P43681 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.9■□□□□ 0.14
CHRNA4P43681 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 RFPL4AP1-201ENST00000530883 850 ntBASIC15.9■□□□□ 0.14
CHRNA4P43681 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA4P43681 LINC01115-203ENST00000606068 577 ntBASIC15.9■□□□□ 0.14
CHRNA4P43681 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
CHRNA4P43681 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 AF228730.6-201ENST00000641497 218 ntBASIC15.9■□□□□ 0.14
CHRNA4P43681 AC084121.3-201ENST00000641716 218 ntBASIC15.9■□□□□ 0.14
CHRNA4P43681 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 TMBIM7P-203ENST00000641617 1718 ntBASIC15.9■□□□□ 0.14
CHRNA4P43681 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA4P43681 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA4P43681 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA4P43681 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA4P43681 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHRNA4P43681 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA4P43681 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CHRNA4P43681 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA4P43681 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHRNA4P43681 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CHRNA4P43681 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CHRNA4P43681 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA4P43681 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA4P43681 AC055876.3-201ENST00000431496 288 ntBASIC15.89■□□□□ 0.13
CHRNA4P43681 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.89■□□□□ 0.13
CHRNA4P43681 AC044860.1-202ENST00000559481 777 ntBASIC15.89■□□□□ 0.13
CHRNA4P43681 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.89■□□□□ 0.13
CHRNA4P43681 AC138649.4-201ENST00000612222 287 ntBASIC15.89■□□□□ 0.13
CHRNA4P43681 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHRNA4P43681 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms