Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT20P35900 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT20P35900 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT20P35900 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT20P35900 AP000842.3-202ENST00000569238 1080 ntBASIC15.09■□□□□ 0.01
KRT20P35900 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 AL596442.2-201ENST00000610240 980 ntBASIC15.09■□□□□ 0.01
KRT20P35900 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT20P35900 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT20P35900 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT20P35900 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT20P35900 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT20P35900 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT20P35900 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.08■□□□□ 0.01
KRT20P35900 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
KRT20P35900 AL592424.1-201ENST00000563624 1536 ntBASIC15.08■□□□□ 0.01
KRT20P35900 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
KRT20P35900 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.08■□□□□ 0
KRT20P35900 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
KRT20P35900 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.08■□□□□ 0
KRT20P35900 SSR4P1-203ENST00000599569 2260 ntBASIC15.08■□□□□ 0
KRT20P35900 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
KRT20P35900 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.08■□□□□ 0
KRT20P35900 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
KRT20P35900 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 AC004461.1-201ENST00000412461 403 ntBASIC15.08■□□□□ 0
KRT20P35900 AP006288.1-201ENST00000446065 395 ntBASIC15.08■□□□□ 0
KRT20P35900 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.08■□□□□ 0
KRT20P35900 RNA5SP410-201ENST00000516285 106 ntBASIC15.08■□□□□ 0
KRT20P35900 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
KRT20P35900 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.08■□□□□ 0
KRT20P35900 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.08■□□□□ 0
KRT20P35900 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.08■□□□□ 0
KRT20P35900 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.08■□□□□ 0
KRT20P35900 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
KRT20P35900 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.08■□□□□ 0
KRT20P35900 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
KRT20P35900 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT20P35900 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 AL589702.1-201ENST00000641229 1509 ntBASIC15.07■□□□□ 0
KRT20P35900 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
KRT20P35900 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
KRT20P35900 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
KRT20P35900 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
KRT20P35900 AL009178.2-201ENST00000597278 2719 ntBASIC15.07■□□□□ 0
KRT20P35900 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.07■□□□□ 0
KRT20P35900 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT20P35900 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.07■□□□□ 0
KRT20P35900 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms