Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.29■□□□□ 0.2
PTPN7P35236 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN7P35236 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN7P35236 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN7P35236 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN7P35236 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN7P35236 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN7P35236 TARDBPP1-201ENST00000442013 1203 ntBASIC16.28■□□□□ 0.2
PTPN7P35236 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN7P35236 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN7P35236 AC003101.2-201ENST00000612557 442 ntBASIC16.28■□□□□ 0.2
PTPN7P35236 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN7P35236 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN7P35236 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN7P35236 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN7P35236 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PTPN7P35236 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN7P35236 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN7P35236 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTPN7P35236 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN7P35236 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms