Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 RPL5P21-201ENST00000404620 815 ntBASIC16.54■□□□□ 0.24
MMP8P22894 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP8P22894 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP8P22894 TOMM22P5-201ENST00000416399 439 ntBASIC16.54■□□□□ 0.24
MMP8P22894 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
MMP8P22894 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP8P22894 AC241585.1-201ENST00000433527 519 ntBASIC16.54■□□□□ 0.24
MMP8P22894 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP8P22894 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 AC044860.1-202ENST00000559481 777 ntBASIC16.54■□□□□ 0.24
MMP8P22894 AC015910.1-201ENST00000579400 975 ntBASIC16.54■□□□□ 0.24
MMP8P22894 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.54■□□□□ 0.24
MMP8P22894 GPALPP1-207ENST00000611650 899 ntBASIC16.54■□□□□ 0.24
MMP8P22894 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MMP8P22894 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP8P22894 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
MMP8P22894 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP8P22894 AL596257.1-201ENST00000641463 2694 ntBASIC16.53■□□□□ 0.24
MMP8P22894 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP8P22894 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 AC006058.4-201ENST00000624016 1670 ntBASIC16.53■□□□□ 0.24
MMP8P22894 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP8P22894 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP8P22894 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MMP8P22894 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.53■□□□□ 0.24
MMP8P22894 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP8P22894 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP8P22894 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MMP8P22894 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP8P22894 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP8P22894 AC009477.1-201ENST00000452936 217 ntBASIC16.53■□□□□ 0.24
MMP8P22894 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.53■□□□□ 0.24
MMP8P22894 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP8P22894 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP8P22894 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP8P22894 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
MMP8P22894 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP8P22894 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP8P22894 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms