Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGB4P16144 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGB4P16144 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ITGB4P16144 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGB4P16144 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 AC024681.1-201ENST00000521917 487 ntBASIC19.69■□□□□ 0.74
ITGB4P16144 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ITGB4P16144 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGB4P16144 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.68■□□□□ 0.74
ITGB4P16144 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ITGB4P16144 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.68■□□□□ 0.74
ITGB4P16144 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ITGB4P16144 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.68■□□□□ 0.74
ITGB4P16144 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
ITGB4P16144 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.68■□□□□ 0.74
ITGB4P16144 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.68■□□□□ 0.74
ITGB4P16144 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ITGB4P16144 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 AC090164.2-201ENST00000611487 516 ntBASIC19.68■□□□□ 0.74
ITGB4P16144 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.68■□□□□ 0.74
ITGB4P16144 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
ITGB4P16144 AC024909.3-201ENST00000611513 2257 ntBASIC19.68■□□□□ 0.74
ITGB4P16144 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 AL662844.4-201ENST00000606367 2838 ntBASIC19.68■□□□□ 0.74
ITGB4P16144 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.68■□□□□ 0.74
ITGB4P16144 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITGB4P16144 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.67■□□□□ 0.74
ITGB4P16144 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.67■□□□□ 0.74
ITGB4P16144 RN7SL181P-201ENST00000462921 277 ntBASIC19.67■□□□□ 0.74
ITGB4P16144 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.67■□□□□ 0.74
ITGB4P16144 AP000593.2-201ENST00000542775 1433 ntBASIC19.67■□□□□ 0.74
ITGB4P16144 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.67■□□□□ 0.74
ITGB4P16144 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 AC234782.1-201ENST00000451950 919 ntBASIC19.67■□□□□ 0.74
ITGB4P16144 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.67■□□□□ 0.74
ITGB4P16144 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.67■□□□□ 0.74
ITGB4P16144 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.67■□□□□ 0.74
ITGB4P16144 AC132192.2-201ENST00000596206 1147 ntBASIC19.67■□□□□ 0.74
ITGB4P16144 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ITGB4P16144 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.67■□□□□ 0.74
ITGB4P16144 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITGB4P16144 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.66■□□□□ 0.74
ITGB4P16144 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.66■□□□□ 0.74
ITGB4P16144 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.66■□□□□ 0.74
ITGB4P16144 AC092978.1-202ENST00000637590 1327 ntBASIC19.66■□□□□ 0.74
ITGB4P16144 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ITGB4P16144 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITGB4P16144 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ITGB4P16144 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ITGB4P16144 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ITGB4P16144 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITGB4P16144 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ITGB4P16144 AC127383.1-201ENST00000444697 1800 ntBASIC19.66■□□□□ 0.74
ITGB4P16144 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ITGB4P16144 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITGB4P16144 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ITGB4P16144 CEP164P1-201ENST00000455142 418 ntBASIC19.66■□□□□ 0.74
ITGB4P16144 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.66■□□□□ 0.74
ITGB4P16144 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms