Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRAFP15056 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.3■□□□□ 0.2
BRAFP15056 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRAFP15056 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRAFP15056 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.3■□□□□ 0.2
BRAFP15056 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRAFP15056 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.3■□□□□ 0.2
BRAFP15056 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 LINC01101-201ENST00000622953 1884 ntBASIC16.29■□□□□ 0.2
BRAFP15056 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.29■□□□□ 0.2
BRAFP15056 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BRAFP15056 TIMM8BP1-201ENST00000452384 211 ntBASIC16.29■□□□□ 0.2
BRAFP15056 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.29■□□□□ 0.2
BRAFP15056 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 FAM86C2P-203ENST00000528684 1004 ntBASIC16.29■□□□□ 0.2
BRAFP15056 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.29■□□□□ 0.2
BRAFP15056 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 AC243562.1-201ENST00000560672 389 ntBASIC16.29■□□□□ 0.2
BRAFP15056 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
BRAFP15056 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.29■□□□□ 0.2
BRAFP15056 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BRAFP15056 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 PCDHA3-202ENST00000532566 4594 ntBASIC16.29■□□□□ 0.2
BRAFP15056 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
BRAFP15056 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.29■□□□□ 0.2
BRAFP15056 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.29■□□□□ 0.2
BRAFP15056 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRAFP15056 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
BRAFP15056 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.28■□□□□ 0.2
BRAFP15056 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BRAFP15056 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.28■□□□□ 0.2
BRAFP15056 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 AKAP8P1-201ENST00000434743 1349 ntBASIC16.28■□□□□ 0.2
BRAFP15056 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
BRAFP15056 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 AC011477.6-201ENST00000604980 1927 ntBASIC16.28■□□□□ 0.2
BRAFP15056 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.28■□□□□ 0.2
BRAFP15056 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.28■□□□□ 0.2
BRAFP15056 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BRAFP15056 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BRAFP15056 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms