Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA4P12838 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA4P12838 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC138035.3-201ENST00000622706 2791 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA4P12838 MIR648-201ENST00000385046 94 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 AC002056.1-201ENST00000395613 760 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 AC092474.2-201ENST00000424288 719 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC074386.1-202ENST00000463561 864 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DEFA4P12838 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC112191.1-201ENST00000523689 701 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC068137.2-201ENST00000605408 478 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 AL078644.1-201ENST00000609881 752 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 AC027601.4-201ENST00000611259 610 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
DEFA4P12838 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.91□□□□□ -0.34
DEFA4P12838 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
DEFA4P12838 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA4P12838 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.91□□□□□ -0.34
DEFA4P12838 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
DEFA4P12838 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA4P12838 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA4P12838 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA4P12838 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA4P12838 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.9□□□□□ -0.34
DEFA4P12838 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA4P12838 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 AL121894.2-201ENST00000602977 491 ntBASIC12.9□□□□□ -0.34
DEFA4P12838 BX640515.1-201ENST00000617215 977 ntBASIC12.9□□□□□ -0.34
DEFA4P12838 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DEFA4P12838 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA4P12838 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA4P12838 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.9□□□□□ -0.35
DEFA4P12838 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.9□□□□□ -0.35
DEFA4P12838 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
DEFA4P12838 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
DEFA4P12838 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
DEFA4P12838 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms