Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPRFP10586 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPRFP10586 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPRFP10586 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 ACTG1P2-201ENST00000415776 1125 ntBASIC17.7■□□□□ 0.42
PTPRFP10586 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPRFP10586 ACTG1P11-201ENST00000425411 1125 ntBASIC17.7■□□□□ 0.42
PTPRFP10586 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPRFP10586 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.7■□□□□ 0.42
PTPRFP10586 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPRFP10586 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPRFP10586 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTPRFP10586 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPRFP10586 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPRFP10586 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPRFP10586 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PTPRFP10586 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPRFP10586 PDIA3P2-201ENST00000428073 158 ntBASIC17.69■□□□□ 0.42
PTPRFP10586 MARK2P5-201ENST00000507649 634 ntBASIC17.69■□□□□ 0.42
PTPRFP10586 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.69■□□□□ 0.42
PTPRFP10586 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PTPRFP10586 SPCS2P2-201ENST00000603270 608 ntBASIC17.69■□□□□ 0.42
PTPRFP10586 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.69■□□□□ 0.42
PTPRFP10586 AL358472.3-201ENST00000608147 415 ntBASIC17.69■□□□□ 0.42
PTPRFP10586 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPRFP10586 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTPRFP10586 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPRFP10586 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PTPRFP10586 AC055811.4-201ENST00000624039 1754 ntBASIC17.69■□□□□ 0.42
PTPRFP10586 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPRFP10586 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPRFP10586 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPRFP10586 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPRFP10586 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPRFP10586 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPRFP10586 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPRFP10586 AC138466.3-201ENST00000619983 221 ntBASIC17.68■□□□□ 0.42
PTPRFP10586 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPRFP10586 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPRFP10586 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPRFP10586 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPRFP10586 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPRFP10586 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PTPRFP10586 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 MIR33B-201ENST00000385104 96 ntBASIC17.68■□□□□ 0.42
PTPRFP10586 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 EEF1DP6-201ENST00000449232 372 ntBASIC17.68■□□□□ 0.42
PTPRFP10586 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPRFP10586 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPRFP10586 MIR4706-201ENST00000582134 82 ntBASIC17.68■□□□□ 0.42
PTPRFP10586 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPRFP10586 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTPRFP10586 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRFP10586 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms