Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 AC127383.1-201ENST00000444697 1800 ntBASIC16.57■□□□□ 0.24
RARAP10276 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RARAP10276 KRT18P13-201ENST00000400056 1290 ntBASIC16.57■□□□□ 0.24
RARAP10276 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.57■□□□□ 0.24
RARAP10276 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.57■□□□□ 0.24
RARAP10276 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.57■□□□□ 0.24
RARAP10276 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.57■□□□□ 0.24
RARAP10276 MIR4453-201ENST00000584019 89 ntBASIC16.57■□□□□ 0.24
RARAP10276 AL133215.2-201ENST00000609242 977 ntBASIC16.57■□□□□ 0.24
RARAP10276 AP001059.3-201ENST00000619053 235 ntBASIC16.57■□□□□ 0.24
RARAP10276 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RARAP10276 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RARAP10276 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RARAP10276 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.57■□□□□ 0.24
RARAP10276 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RARAP10276 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RARAP10276 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.56■□□□□ 0.24
RARAP10276 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.56■□□□□ 0.24
RARAP10276 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RARAP10276 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.56■□□□□ 0.24
RARAP10276 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.56■□□□□ 0.24
RARAP10276 SNHG9-202ENST00000564014 471 ntBASIC16.56■□□□□ 0.24
RARAP10276 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 RN7SL828P-201ENST00000607615 303 ntBASIC16.56■□□□□ 0.24
RARAP10276 AL596442.2-201ENST00000610240 980 ntBASIC16.56■□□□□ 0.24
RARAP10276 AC007967.4-201ENST00000614700 386 ntBASIC16.56■□□□□ 0.24
RARAP10276 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.56■□□□□ 0.24
RARAP10276 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.56■□□□□ 0.24
RARAP10276 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.56■□□□□ 0.24
RARAP10276 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RARAP10276 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RARAP10276 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms