Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.89■□□□□ 0.13
RETP07949 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.89■□□□□ 0.13
RETP07949 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.89■□□□□ 0.13
RETP07949 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.89■□□□□ 0.13
RETP07949 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.89■□□□□ 0.13
RETP07949 CALR4P-201ENST00000431943 946 ntBASIC15.89■□□□□ 0.13
RETP07949 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.89■□□□□ 0.13
RETP07949 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.89■□□□□ 0.13
RETP07949 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.89■□□□□ 0.13
RETP07949 AP001258.2-201ENST00000529891 490 ntBASIC15.89■□□□□ 0.13
RETP07949 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RETP07949 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.89■□□□□ 0.13
RETP07949 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.89■□□□□ 0.13
RETP07949 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.89■□□□□ 0.13
RETP07949 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 AL139011.1-202ENST00000642063 584 ntBASIC15.89■□□□□ 0.13
RETP07949 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RETP07949 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RETP07949 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RETP07949 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
RETP07949 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.89■□□□□ 0.13
RETP07949 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.88■□□□□ 0.13
RETP07949 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.88■□□□□ 0.13
RETP07949 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.88■□□□□ 0.13
RETP07949 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RETP07949 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.88■□□□□ 0.13
RETP07949 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RETP07949 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.88■□□□□ 0.13
RETP07949 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.88■□□□□ 0.13
RETP07949 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.88■□□□□ 0.13
RETP07949 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.88■□□□□ 0.13
RETP07949 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
RETP07949 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.88■□□□□ 0.13
RETP07949 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RETP07949 AL359711.2-201ENST00000563105 872 ntBASIC15.88■□□□□ 0.13
RETP07949 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.88■□□□□ 0.13
RETP07949 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RETP07949 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.88■□□□□ 0.13
RETP07949 AL118558.3-201ENST00000607414 1079 ntBASIC15.88■□□□□ 0.13
RETP07949 AL022328.3-201ENST00000607943 679 ntBASIC15.88■□□□□ 0.13
RETP07949 AC009542.2-202ENST00000619004 1067 ntBASIC15.88■□□□□ 0.13
RETP07949 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RETP07949 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RETP07949 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RETP07949 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 AC024909.3-201ENST00000611513 2257 ntBASIC15.88■□□□□ 0.13
RETP07949 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RETP07949 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RETP07949 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.87■□□□□ 0.13
RETP07949 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RETP07949 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.87■□□□□ 0.13
RETP07949 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 AC132872.4-202ENST00000622924 2756 ntBASIC15.87■□□□□ 0.13
RETP07949 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RETP07949 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms