Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 AC112693.3-201ENST00000624819 1983 ntBASIC16.55■□□□□ 0.24
ERBB2P04626 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 AC015922.1-201ENST00000421102 1152 ntBASIC16.55■□□□□ 0.24
ERBB2P04626 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 BASP1P1-201ENST00000430708 665 ntBASIC16.55■□□□□ 0.24
ERBB2P04626 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.55■□□□□ 0.24
ERBB2P04626 AC114501.2-201ENST00000439631 535 ntBASIC16.55■□□□□ 0.24
ERBB2P04626 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.55■□□□□ 0.24
ERBB2P04626 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERBB2P04626 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.55■□□□□ 0.24
ERBB2P04626 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.54■□□□□ 0.24
ERBB2P04626 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.54■□□□□ 0.24
ERBB2P04626 AC104640.1-201ENST00000562617 2109 ntBASIC16.54■□□□□ 0.24
ERBB2P04626 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.54■□□□□ 0.24
ERBB2P04626 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.54■□□□□ 0.24
ERBB2P04626 AL589987.1-201ENST00000453380 819 ntBASIC16.54■□□□□ 0.24
ERBB2P04626 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.54■□□□□ 0.24
ERBB2P04626 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 AC004790.1-201ENST00000612686 536 ntBASIC16.54■□□□□ 0.24
ERBB2P04626 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.54■□□□□ 0.24
ERBB2P04626 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
ERBB2P04626 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
ERBB2P04626 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ERBB2P04626 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERBB2P04626 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ERBB2P04626 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERBB2P04626 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.53■□□□□ 0.24
ERBB2P04626 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.53■□□□□ 0.24
ERBB2P04626 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.53■□□□□ 0.24
ERBB2P04626 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.53■□□□□ 0.24
ERBB2P04626 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 FAM8A3P-201ENST00000427218 844 ntBASIC16.53■□□□□ 0.24
ERBB2P04626 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.53■□□□□ 0.24
ERBB2P04626 AL512638.1-201ENST00000457493 794 ntBASIC16.53■□□□□ 0.24
ERBB2P04626 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.53■□□□□ 0.24
ERBB2P04626 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.53■□□□□ 0.24
ERBB2P04626 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.53■□□□□ 0.24
ERBB2P04626 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.53■□□□□ 0.24
ERBB2P04626 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERBB2P04626 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms