Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.39□□□□□ -0.11
P04436 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.39□□□□□ -0.11
P04436 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.39□□□□□ -0.11
P04436 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
P04436 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.39□□□□□ -0.11
P04436 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.39□□□□□ -0.11
P04436 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.39□□□□□ -0.11
P04436 WASH4P-201ENST00000564273 1246 ntBASIC14.39□□□□□ -0.11
P04436 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.39□□□□□ -0.11
P04436 TMEM261P1-201ENST00000604899 340 ntBASIC14.39□□□□□ -0.11
P04436 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
P04436 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.39□□□□□ -0.11
P04436 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
P04436 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
P04436 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
P04436 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.39□□□□□ -0.11
P04436 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
P04436 AP003680.1-201ENST00000598970 3660 ntBASIC14.39□□□□□ -0.11
P04436 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.39□□□□□ -0.11
P04436 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04436 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.39□□□□□ -0.11
P04436 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.38□□□□□ -0.11
P04436 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
P04436 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
P04436 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
P04436 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.38□□□□□ -0.11
P04436 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
P04436 COX5BP8-201ENST00000416911 349 ntBASIC14.38□□□□□ -0.11
P04436 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.38□□□□□ -0.11
P04436 FAM86LP-201ENST00000478302 853 ntBASIC14.38□□□□□ -0.11
P04436 RPL13AP25-201ENST00000484130 612 ntBASIC14.38□□□□□ -0.11
P04436 ELK1P1-201ENST00000485699 580 ntBASIC14.38□□□□□ -0.11
P04436 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.38□□□□□ -0.11
P04436 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.38□□□□□ -0.11
P04436 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.38□□□□□ -0.11
P04436 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.38□□□□□ -0.11
P04436 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
P04436 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
P04436 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
P04436 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
P04436 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04436 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
P04436 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
P04436 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.37□□□□□ -0.11
P04436 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04436 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
P04436 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
P04436 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms