Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD74P04233 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.29□□□□□ -0.28
CD74P04233 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CD74P04233 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 AL513480.1-201ENST00000451731 511 ntBASIC13.29□□□□□ -0.28
CD74P04233 AC108073.2-201ENST00000464002 357 ntBASIC13.29□□□□□ -0.28
CD74P04233 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.29□□□□□ -0.28
CD74P04233 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.29□□□□□ -0.28
CD74P04233 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.29□□□□□ -0.28
CD74P04233 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.29□□□□□ -0.28
CD74P04233 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.29□□□□□ -0.28
CD74P04233 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.29□□□□□ -0.28
CD74P04233 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CD74P04233 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 REXO1L6P-202ENST00000619970 1078 ntBASIC13.29□□□□□ -0.28
CD74P04233 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.29□□□□□ -0.28
CD74P04233 AP000550.4-202ENST00000639755 178 ntBASIC13.29□□□□□ -0.28
CD74P04233 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.29□□□□□ -0.28
CD74P04233 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.29□□□□□ -0.28
CD74P04233 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD74P04233 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.29□□□□□ -0.28
CD74P04233 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 AC079781.5-202ENST00000641784 3743 ntBASIC13.28□□□□□ -0.28
CD74P04233 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CD74P04233 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.28□□□□□ -0.28
CD74P04233 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 AC004987.2-201ENST00000395959 1148 ntBASIC13.28□□□□□ -0.28
CD74P04233 RPL5P21-201ENST00000404620 815 ntBASIC13.28□□□□□ -0.28
CD74P04233 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.28□□□□□ -0.28
CD74P04233 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CD74P04233 OR7E14P-202ENST00000530490 1290 ntBASIC13.28□□□□□ -0.28
CD74P04233 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.28□□□□□ -0.28
CD74P04233 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.28□□□□□ -0.28
CD74P04233 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.28□□□□□ -0.28
CD74P04233 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.28□□□□□ -0.28
CD74P04233 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.28□□□□□ -0.28
CD74P04233 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.28□□□□□ -0.28
CD74P04233 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 MIR600HG-201ENST00000449175 5984 ntBASIC13.28□□□□□ -0.28
CD74P04233 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 OR2I1P-210ENST00000642037 4691 ntBASIC13.28□□□□□ -0.28
CD74P04233 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.28□□□□□ -0.28
CD74P04233 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.28□□□□□ -0.28
CD74P04233 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD74P04233 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.27□□□□□ -0.28
CD74P04233 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms