Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC015910.1-201ENST00000579400 975 ntBASIC14.53□□□□□ -0.08
NKX2-2O95096 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX2-2O95096 AC106028.4-201ENST00000614509 607 ntBASIC14.53□□□□□ -0.08
NKX2-2O95096 AL390754.1-201ENST00000619088 582 ntBASIC14.53□□□□□ -0.08
NKX2-2O95096 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-2O95096 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-2O95096 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-2O95096 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NKX2-2O95096 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX2-2O95096 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX2-2O95096 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
NKX2-2O95096 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX2-2O95096 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX2-2O95096 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX2-2O95096 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX2-2O95096 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NKX2-2O95096 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 AC084364.1-201ENST00000551967 1556 ntBASIC14.52□□□□□ -0.08
NKX2-2O95096 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX2-2O95096 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NKX2-2O95096 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX2-2O95096 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX2-2O95096 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.52□□□□□ -0.08
NKX2-2O95096 KRT8P44-201ENST00000441609 1350 ntBASIC14.52□□□□□ -0.08
NKX2-2O95096 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX2-2O95096 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX2-2O95096 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX2-2O95096 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 AL133267.1-201ENST00000398220 340 ntBASIC14.52□□□□□ -0.09
NKX2-2O95096 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-2O95096 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-2O95096 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-2O95096 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-2O95096 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 RFPL4AP1-201ENST00000530883 850 ntBASIC14.52□□□□□ -0.09
NKX2-2O95096 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX2-2O95096 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 AL390955.2-201ENST00000603032 514 ntBASIC14.52□□□□□ -0.09
NKX2-2O95096 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.52□□□□□ -0.09
NKX2-2O95096 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-2O95096 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-2O95096 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC006486.2-201ENST00000624246 2199 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NKX2-2O95096 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 HYMAI-201ENST00000635591 3347 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.51□□□□□ -0.09
NKX2-2O95096 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NKX2-2O95096 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms