Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 AC079776.2-201ENST00000641154 1609 ntBASIC13.73□□□□□ -0.21
CCNKO75909 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
CCNKO75909 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.73□□□□□ -0.21
CCNKO75909 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.73□□□□□ -0.21
CCNKO75909 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 HLA-F-220ENST00000434407 884 ntBASIC13.73□□□□□ -0.21
CCNKO75909 SNORA78-201ENST00000459373 127 ntBASIC13.73□□□□□ -0.21
CCNKO75909 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.73□□□□□ -0.21
CCNKO75909 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 AD001527.2-201ENST00000622994 785 ntBASIC13.73□□□□□ -0.21
CCNKO75909 AC141257.4-201ENST00000634557 245 ntBASIC13.73□□□□□ -0.21
CCNKO75909 AC136944.6-201ENST00000634818 245 ntBASIC13.73□□□□□ -0.21
CCNKO75909 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 AL592424.1-201ENST00000563624 1536 ntBASIC13.73□□□□□ -0.21
CCNKO75909 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 KRT8P39-201ENST00000396270 1433 ntBASIC13.73□□□□□ -0.21
CCNKO75909 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNKO75909 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
CCNKO75909 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNKO75909 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 AC009336.1-201ENST00000608941 1553 ntBASIC13.72□□□□□ -0.21
CCNKO75909 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCNKO75909 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 SPDYE15P-201ENST00000424157 909 ntBASIC13.72□□□□□ -0.21
CCNKO75909 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNKO75909 AC008550.1-201ENST00000511500 884 ntBASIC13.72□□□□□ -0.21
CCNKO75909 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNKO75909 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.72□□□□□ -0.21
CCNKO75909 AC073912.3-201ENST00000624414 853 ntBASIC13.72□□□□□ -0.21
CCNKO75909 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCNKO75909 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 AC004899.2-201ENST00000622993 3860 ntBASIC13.72□□□□□ -0.21
CCNKO75909 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 AC083964.2-201ENST00000623988 2396 ntBASIC13.72□□□□□ -0.21
CCNKO75909 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.72□□□□□ -0.21
CCNKO75909 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CCNKO75909 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCNKO75909 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCNKO75909 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms