Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 IGHV3-42-201ENST00000520410 361 ntBASIC14.83□□□□□ -0.04
HCN1O60741 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.83□□□□□ -0.04
HCN1O60741 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.83□□□□□ -0.04
HCN1O60741 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.83□□□□□ -0.04
HCN1O60741 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.83□□□□□ -0.04
HCN1O60741 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.83□□□□□ -0.04
HCN1O60741 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.83□□□□□ -0.04
HCN1O60741 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.83□□□□□ -0.04
HCN1O60741 AC003101.2-201ENST00000612557 442 ntBASIC14.83□□□□□ -0.04
HCN1O60741 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 AC073347.1-201ENST00000421633 2643 ntBASIC14.83□□□□□ -0.04
HCN1O60741 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.83□□□□□ -0.04
HCN1O60741 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HCN1O60741 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HCN1O60741 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.83□□□□□ -0.04
HCN1O60741 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.82□□□□□ -0.04
HCN1O60741 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.82□□□□□ -0.04
HCN1O60741 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
HCN1O60741 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.82□□□□□ -0.04
HCN1O60741 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.82□□□□□ -0.04
HCN1O60741 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.82□□□□□ -0.04
HCN1O60741 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.82□□□□□ -0.04
HCN1O60741 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.82□□□□□ -0.04
HCN1O60741 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.82□□□□□ -0.04
HCN1O60741 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
HCN1O60741 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.82□□□□□ -0.04
HCN1O60741 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HCN1O60741 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCN1O60741 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.81□□□□□ -0.04
HCN1O60741 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HCN1O60741 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.81□□□□□ -0.04
HCN1O60741 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HCN1O60741 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.81□□□□□ -0.04
HCN1O60741 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.81□□□□□ -0.04
HCN1O60741 AL512638.1-201ENST00000457493 794 ntBASIC14.81□□□□□ -0.04
HCN1O60741 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 AC097493.3-201ENST00000509725 367 ntBASIC14.81□□□□□ -0.04
HCN1O60741 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.81□□□□□ -0.04
HCN1O60741 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.81□□□□□ -0.04
HCN1O60741 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.81□□□□□ -0.04
HCN1O60741 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCN1O60741 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.81□□□□□ -0.04
HCN1O60741 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms