Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 PTENP1-202ENST00000532280 3996 ntBASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 LINC01230-201ENST00000625222 3017 ntBASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 NKAPP1-205ENST00000585790 367 ntBASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 AL591684.3-201ENST00000605187 298 ntBASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 AC027612.1-201ENST00000445234 2395 ntBASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 AC140479.7-201ENST00000636301 2332 ntBASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ERGIC3Q9Y282 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 AC245100.5-201ENST00000452108 331 ntBASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 DUX4L26-201ENST00000489078 1255 ntBASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 AP002414.4-201ENST00000589764 1148 ntBASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERGIC3Q9Y282 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms