Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 SPTLC1P1-201ENST00000447199 261 ntBASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 SERBP1P5-201ENST00000510079 1181 ntBASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AL391069.4-201ENST00000609583 481 ntBASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AL158212.4-201ENST00000624062 1286 ntBASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AL121723.1-201ENST00000445194 1519 ntBASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 SPDYE19P-201ENST00000338590 713 ntBASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 GNAQP1-201ENST00000444815 1067 ntBASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 KRT18P43-201ENST00000469825 1281 ntBASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 AC046158.3-201ENST00000624947 2558 ntBASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHA4Q9UN74 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHA4Q9UN74 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHA4Q9UN74 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHA4Q9UN74 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHA4Q9UN74 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms