Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC079140.1-201ENST00000508039 487 ntBASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC004835.2-201ENST00000603762 682 ntBASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC091951.1-201ENST00000512854 2465 ntBASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AC027612.4-201ENST00000605371 583 ntBASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT11Q9UKZ1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 C18orf15-201ENST00000623680 2534 ntBASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms