Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AC013268.4-201ENST00000637413 2228 ntBASIC13.99□□□□□ -0.17
DUX4Q9UBX2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 AC087641.1-201ENST00000557561 1021 ntBASIC13.98□□□□□ -0.17
DUX4Q9UBX2 PDPK2P-202ENST00000562415 1191 ntBASIC13.98□□□□□ -0.17
DUX4Q9UBX2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 MIR4515-201ENST00000584082 81 ntBASIC13.98□□□□□ -0.17
DUX4Q9UBX2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.98□□□□□ -0.17
DUX4Q9UBX2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AC040169.1-201ENST00000565382 521 ntBASIC13.97□□□□□ -0.17
DUX4Q9UBX2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AC013467.2-201ENST00000605472 835 ntBASIC13.97□□□□□ -0.17
DUX4Q9UBX2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AC007064.4-201ENST00000637740 555 ntBASIC13.97□□□□□ -0.17
DUX4Q9UBX2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AC026748.1-201ENST00000624349 3251 ntBASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUX4Q9UBX2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX4Q9UBX2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUX4Q9UBX2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms