Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 AC006001.1-201ENST00000325130 474 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 KRT18P25-201ENST00000508931 1278 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 AC138951.2-201ENST00000623455 1161 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 PCDHA14-201ENST00000506751 2298 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 AL162727.3-201ENST00000635661 2787 ntBASIC16.64■□□□□ 0.25
TLR9Q9NR96 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TLR9Q9NR96 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TLR9Q9NR96 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 ALOX12P2-203ENST00000570921 1945 ntBASIC16.63■□□□□ 0.25
TLR9Q9NR96 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 FAM197Y7-201ENST00000432892 766 ntBASIC16.63■□□□□ 0.25
TLR9Q9NR96 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 AC015910.1-201ENST00000579400 975 ntBASIC16.63■□□□□ 0.25
TLR9Q9NR96 AP005019.2-201ENST00000615104 511 ntBASIC16.63■□□□□ 0.25
TLR9Q9NR96 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms