Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.18■□□□□ 0.18
SP110Q9HB58 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.18■□□□□ 0.18
SP110Q9HB58 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.18■□□□□ 0.18
SP110Q9HB58 TARDBPP1-201ENST00000442013 1203 ntBASIC16.18■□□□□ 0.18
SP110Q9HB58 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.18■□□□□ 0.18
SP110Q9HB58 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 SDHAP3-202ENST00000515467 728 ntBASIC16.18■□□□□ 0.18
SP110Q9HB58 RNA5SP421-201ENST00000516864 134 ntBASIC16.18■□□□□ 0.18
SP110Q9HB58 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.18■□□□□ 0.18
SP110Q9HB58 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.18■□□□□ 0.18
SP110Q9HB58 AC044860.1-202ENST00000559481 777 ntBASIC16.18■□□□□ 0.18
SP110Q9HB58 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.18■□□□□ 0.18
SP110Q9HB58 AC074044.1-201ENST00000609673 707 ntBASIC16.18■□□□□ 0.18
SP110Q9HB58 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.18■□□□□ 0.18
SP110Q9HB58 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.18■□□□□ 0.18
SP110Q9HB58 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SP110Q9HB58 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.17■□□□□ 0.18
SP110Q9HB58 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
SP110Q9HB58 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SP110Q9HB58 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SP110Q9HB58 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.17■□□□□ 0.18
SP110Q9HB58 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.17■□□□□ 0.18
SP110Q9HB58 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.17■□□□□ 0.18
SP110Q9HB58 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.17■□□□□ 0.18
SP110Q9HB58 AC004890.2-204ENST00000481968 304 ntBASIC16.17■□□□□ 0.18
SP110Q9HB58 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.17■□□□□ 0.18
SP110Q9HB58 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.17■□□□□ 0.18
SP110Q9HB58 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.17■□□□□ 0.18
SP110Q9HB58 AC022144.1-201ENST00000602255 1580 ntBASIC16.17■□□□□ 0.18
SP110Q9HB58 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP110Q9HB58 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.17■□□□□ 0.18
SP110Q9HB58 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SP110Q9HB58 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms