Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 AL035252.4-201ENST00000624174 288 ntBASIC16.46■□□□□ 0.23
SMOQ99835 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMOQ99835 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SMOQ99835 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SMOQ99835 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.46■□□□□ 0.23
SMOQ99835 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.46■□□□□ 0.23
SMOQ99835 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SMOQ99835 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMOQ99835 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMOQ99835 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.45■□□□□ 0.22
SMOQ99835 CU639417.3-201ENST00000624240 1404 ntBASIC16.45■□□□□ 0.22
SMOQ99835 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SMOQ99835 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
SMOQ99835 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.45■□□□□ 0.22
SMOQ99835 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.45■□□□□ 0.22
SMOQ99835 INE1-201ENST00000456273 945 ntBASIC16.45■□□□□ 0.22
SMOQ99835 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.45■□□□□ 0.22
SMOQ99835 CR383656.12-201ENST00000549567 513 ntBASIC16.45■□□□□ 0.22
SMOQ99835 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.45■□□□□ 0.22
SMOQ99835 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.45■□□□□ 0.22
SMOQ99835 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.45■□□□□ 0.22
SMOQ99835 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.45■□□□□ 0.22
SMOQ99835 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMOQ99835 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.45■□□□□ 0.22
SMOQ99835 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMOQ99835 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.45■□□□□ 0.22
SMOQ99835 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.45■□□□□ 0.22
SMOQ99835 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMOQ99835 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 PAUPAR-201ENST00000630360 2965 ntBASIC16.44■□□□□ 0.22
SMOQ99835 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SMOQ99835 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.44■□□□□ 0.22
SMOQ99835 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.44■□□□□ 0.22
SMOQ99835 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.44■□□□□ 0.22
SMOQ99835 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.44■□□□□ 0.22
SMOQ99835 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.44■□□□□ 0.22
SMOQ99835 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 IGHV3-72-202ENST00000621503 303 ntBASIC16.44■□□□□ 0.22
SMOQ99835 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.44■□□□□ 0.22
SMOQ99835 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 DRD5P1-201ENST00000456605 1438 ntBASIC16.44■□□□□ 0.22
SMOQ99835 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.44■□□□□ 0.22
SMOQ99835 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.44■□□□□ 0.22
SMOQ99835 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMOQ99835 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 INTS4P2-202ENST00000614726 2019 ntBASIC16.43■□□□□ 0.22
SMOQ99835 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms