Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 AC006011.2-201ENST00000621313 1158 ntBASIC14.94□□□□□ -0.02
NR1H4Q96RI1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 AL023775.1-201ENST00000454907 1746 ntBASIC14.94□□□□□ -0.02
NR1H4Q96RI1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 RNF126P1-202ENST00000569893 925 ntBASIC14.93□□□□□ -0.02
NR1H4Q96RI1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 LINC01023-201ENST00000606054 436 ntBASIC14.93□□□□□ -0.02
NR1H4Q96RI1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 AC152010.1-201ENST00000415779 2006 ntBASIC14.93□□□□□ -0.02
NR1H4Q96RI1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H4Q96RI1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 INTS4P1-203ENST00000641008 3683 ntBASIC14.92□□□□□ -0.02
NR1H4Q96RI1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms