Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 KRT43P-201ENST00000434019 910 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 KRT18P43-201ENST00000469825 1281 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AP001889.1-201ENST00000525414 633 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AC068587.3-201ENST00000526613 355 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AC011477.6-201ENST00000604980 1927 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 AC069224.1-201ENST00000566372 1715 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 PRAL-201ENST00000624952 3286 ntBASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 AP005482.1-201ENST00000563722 1273 ntBASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC85AQ96PX6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 PCDHB19P-201ENST00000570871 2371 ntBASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms