Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AC090616.6-203ENST00000579186 1945 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AL589987.1-201ENST00000453380 819 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 SRD5A3P1-201ENST00000603021 949 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AL096865.1-201ENST00000606796 927 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.1□□□□□ -0.31
GAFA1Q96PS6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.1□□□□□ -0.31
GAFA1Q96PS6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 TOMM22P5-201ENST00000416399 439 ntBASIC13.09□□□□□ -0.31
GAFA1Q96PS6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 AC004790.1-201ENST00000612686 536 ntBASIC13.09□□□□□ -0.31
GAFA1Q96PS6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
GAFA1Q96PS6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.08□□□□□ -0.31
GAFA1Q96PS6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms