Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1LQ96KA5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 AC136759.1-202ENST00000530858 2194 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 DUX4L26-201ENST00000489078 1255 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 KRT18P35-201ENST00000510488 1269 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 AP002469.2-201ENST00000531724 424 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 MIR3180-1-201ENST00000580374 94 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 MIR3180-3-201ENST00000584616 94 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 MTDHP4-201ENST00000600287 670 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 AC091076.1-201ENST00000610741 619 ntBASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPTM1LQ96KA5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.21■□□□□ 0.02
CLPTM1LQ96KA5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 AL031133.1-201ENST00000406807 723 ntBASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 SART3-203ENST00000546611 1184 ntBASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.2■□□□□ 0.02
CLPTM1LQ96KA5 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms