Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AL355864.2-201ENST00000447420 863 ntBASIC15.81■□□□□ 0.12
SIPA1Q96FS4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 KRT18P43-201ENST00000469825 1281 ntBASIC15.81■□□□□ 0.12
SIPA1Q96FS4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC092658.1-201ENST00000505836 891 ntBASIC15.81■□□□□ 0.12
SIPA1Q96FS4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC068587.3-201ENST00000526613 355 ntBASIC15.81■□□□□ 0.12
SIPA1Q96FS4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC009486.1-201ENST00000569860 813 ntBASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 AD000864.1-201ENST00000624076 2295 ntBASIC15.8■□□□□ 0.12
SIPA1Q96FS4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.8■□□□□ 0.12
SIPA1Q96FS4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 AC005229.1-201ENST00000392885 409 ntBASIC15.8■□□□□ 0.12
SIPA1Q96FS4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 BNIP3P42-201ENST00000454982 569 ntBASIC15.8■□□□□ 0.12
SIPA1Q96FS4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 BNIP3P29-201ENST00000598302 571 ntBASIC15.8■□□□□ 0.12
SIPA1Q96FS4 AC011447.5-201ENST00000616168 564 ntBASIC15.8■□□□□ 0.12
SIPA1Q96FS4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.8■□□□□ 0.12
SIPA1Q96FS4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AL121723.1-201ENST00000445194 1519 ntBASIC15.79■□□□□ 0.12
SIPA1Q96FS4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.79■□□□□ 0.12
SIPA1Q96FS4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms