Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRAMD1AQ96CP6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC026748.1-201ENST00000624349 3251 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 KLF2P3-201ENST00000451977 1087 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 IGHV3-62-201ENST00000520057 340 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC243562.1-201ENST00000560672 389 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC091167.2-201ENST00000579581 588 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC084121.4-201ENST00000641598 221 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AF228730.8-201ENST00000642140 221 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC126755.1-201ENST00000525846 6405 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AL592424.1-201ENST00000563624 1536 ntBASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRAMD1AQ96CP6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 AC063926.2-201ENST00000623766 1308 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 FAM207CP-201ENST00000443486 507 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 TERF1P3-201ENST00000505638 1227 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 AC107918.2-201ENST00000530817 355 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 AC109635.5-201ENST00000533593 962 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 DUX4L27-201ENST00000554796 1261 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 AC087641.1-201ENST00000557561 1021 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 AL135744.1-201ENST00000565098 629 ntBASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRAMD1AQ96CP6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms