Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 BTBD7P1-201ENST00000447253 1453 ntBASIC13.87□□□□□ -0.19
TMEM54Q969K7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 RPL5P21-201ENST00000404620 815 ntBASIC13.87□□□□□ -0.19
TMEM54Q969K7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AC004461.2-201ENST00000629517 803 ntBASIC13.87□□□□□ -0.19
TMEM54Q969K7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 AC084364.1-201ENST00000551967 1556 ntBASIC13.87□□□□□ -0.19
TMEM54Q969K7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM54Q969K7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TMEM54Q969K7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 AL133267.1-201ENST00000398220 340 ntBASIC13.86□□□□□ -0.19
TMEM54Q969K7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 BASP1P1-201ENST00000430708 665 ntBASIC13.86□□□□□ -0.19
TMEM54Q969K7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 AC092337.1-201ENST00000568699 1129 ntBASIC13.86□□□□□ -0.19
TMEM54Q969K7 AC005498.2-205ENST00000593218 784 ntBASIC13.86□□□□□ -0.19
TMEM54Q969K7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 AC022144.1-201ENST00000602255 1580 ntBASIC13.86□□□□□ -0.19
TMEM54Q969K7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM54Q969K7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM54Q969K7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms